Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_3754TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fra:Francci3_3522 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; TC 3.A.1.3.-. (266 aa)    
Predicted Functional Partners:
Aave_3756
PFAM: extracellular solute-binding protein, family 3; KEGG: fal:FRAAL5714 putative glutamate binding protein of ABC transporter system; TC 3.A.1.3.-.
 
 0.993
Aave_3755
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB0689 putative permease component of ABC transporter; TC 3.A.1.3.-.
 
  
 
0.976
Aave_0299
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_0403 ABC transporter-related protein; TC 3.A.1.3.-.
 
 
 0.896
Aave_1012
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: rfr:Rfer_2971 ABC transporter-related protein; TC 3.A.1.3.-.
 
 
 0.896
Aave_4070
PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_3901 ABC transporter-related protein.
 
 
 0.895
Aave_0208
PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: rso:RSc2106 probable amino-acid ATP-binding ABC transporter protein; TC 3.A.1.3.-.
 
 
 0.894
Aave_1010
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; KEGG: reu:Reut_A3014 extracellular solute-binding protein, family 3; TC 3.A.1.3.-.
 
 0.850
Aave_0301
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: extracellular solute-binding protein, family 3; KEGG: pol:Bpro_0401 extracellular solute-binding protein, family 3; TC 3.A.1.3.-; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.819
Aave_4222
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: extracellular solute-binding protein, family 3; KEGG: bja:bll0102 glutamate/aspartate periplasmic binding protein precursor; TC 3.A.1.3.-.
 
 
 0.794
Aave_4074
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: extracellular solute-binding protein, family 3; KEGG: rme:Rmet_2540 extracellular solute-binding protein, family 3; TC 3.A.1.3.-.
 
 
 0.774
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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