Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Aave_3776PFAM: Cupin 2, conserved barrel domain protein; KEGG: ppu:PP_2071 hypothetical protein. (135 aa)    
Predicted Functional Partners:
Aave_4142
PFAM: glycosyl transferase, family 2; Methionine biosynthesis MetW; Methyltransferase type 11; Methyltransferase type 12; KEGG: rru:Rru_B0044 glycosyl transferase, family 2.
  
  
 0.557
Aave_3777
PFAM: Smr protein/MutS2; KEGG: pol:Bpro_0947 Smr protein/MutS2.
       0.545
Aave_4216
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: psp:PSPPH_3750 non-ribosomal peptide synthetase.
     
 0.472
Aave_2096
PFAM: regulatory protein, ArsR; KEGG: sma:SAV6598 ArsR-family transcriptional regulator.
  
     0.461
Aave_0043
PFAM: NIPSNAP family containing protein; KEGG: bur:Bcep18194_B0447 protein of unknown function DUF1099.
  
     0.433
Aave_3774
KEGG: ssp:SSP1055 hypothetical protein.
       0.406
Aave_1209
PFAM: sugar transferase; KEGG: rme:Rmet_2718 sugar transferase.
  
  
 0.400
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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