Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_38755-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bpm:BURPS1710b_A2377 fumarylacetoacetate (FAA) hydrolase family protein. (283 aa)    
Predicted Functional Partners:
Aave_3876
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B2957 putative short-chain dehydrogenase/reductase.
 
 
   0.754
Aave_1379
PFAM: restriction endonuclease; KEGG: pol:Bpro_3356 restriction endonuclease.
  
    0.712
kdgT
2-keto-3-deoxygluconate permease; The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system. Belongs to the KdgT transporter family.
       0.467
Aave_4269
KEGG: reu:Reut_C5928 hydratase/decarboxylase; TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Hydratase/decarboxylase.
  
  
 0.410
Aave_0115
PFAM: aldehyde dehydrogenase; KEGG: pol:Bpro_2298 aldehyde dehydrogenase.
  
 
 0.403
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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