Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_3889PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB1044 inner membrane component of ABC transporter. (551 aa)    
Predicted Functional Partners:
Aave_3891
PFAM: extracellular solute-binding protein, family 1; KEGG: bbr:BB1042 extracellular solute-binding protein.
 
 
 0.994
Aave_3890
PFAM: ABC transporter-related protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bbr:BB1043 ATP-binding component of ABC transporter; Belongs to the ABC transporter superfamily.
 
 0.989
Aave_0913
PFAM: ABC transporter-related protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rfr:Rfer_1595 ABC transporter-related protein; Belongs to the ABC transporter superfamily.
 
 0.933
Aave_2866
PFAM: extracellular solute-binding protein, family 1; KEGG: bxe:Bxe_C1181 ABC Fe+3 siderophore transporter, periplasmic ligand binding protein.
 
 
 0.922
Aave_0914
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_1594 binding-protein-dependent transport systems inner membrane component.
  
  
 
0.915
Aave_3457
PFAM: ABC transporter-related protein; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rme:Rmet_4843 ABC transporter-related protein.
 
 
 0.776
Aave_3888
PFAM: aminotransferase, class I and II; KEGG: bbr:BB1045 aspartate aminotransferase.
       0.773
Aave_3454
KEGG: rme:Rmet_4840 putative periplasmic solute-binding protein.
 
  
 0.760
Aave_3887
TIGRFAM: phosphonopyruvate hydrolase; KEGG: bbr:BB1046 phosphoenolpyruvate phosphomutase.
       0.710
Aave_3892
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bbr:BB1041 LysR-family transcriptional regulator.
 
     0.545
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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