Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_3978KEGG: reu:Reut_A2583 hypothetical protein. (175 aa)    
Predicted Functional Partners:
Aave_3979
ABC transporter-related protein; PFAM: ABC transporter, transmembrane region; ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_1417 ABC transporter-related protein.
 
     0.950
Aave_3980
TIGRFAM: cyanophycin synthetase; PFAM: phosphoribosylglycinamide synthetase; RimK domain protein ATP-grasp; KEGG: pol:Bpro_1416 cyanophycin synthetase.
 
     0.899
Aave_3981
TIGRFAM: cyanophycin synthetase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; RimK domain protein ATP-grasp; KEGG: pol:Bpro_1415 cyanophycin synthetase.
 
     0.882
Aave_2172
PFAM: acyltransferase 3; KEGG: pol:Bpro_3139 acyltransferase 3.
  
     0.724
Aave_0313
KEGG: pol:Bpro_1153 hypothetical protein.
  
     0.700
Aave_4216
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: psp:PSPPH_3750 non-ribosomal peptide synthetase.
  
 
 0.538
Aave_4079
ABC transporter-related protein; PFAM: ABC transporter, transmembrane region; ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_3906 ABC transporter-related protein.
  
 
 0.537
Aave_0329
PFAM: VanZ family protein; KEGG: rfr:Rfer_3803 VanZ like protein.
  
     0.477
Aave_3977
KEGG: rfr:Rfer_0823 hypothetical protein.
       0.475
Aave_2164
PFAM: histone deacetylase superfamily; KEGG: pol:Bpro_3145 histone deacetylase superfamily.
   
 0.456
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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