Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Aave_4033KEGG: vch:VC1582 hypothetical protein; Belongs to the UPF0753 family. (825 aa)    
Predicted Functional Partners:
Aave_4034
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: vch:VC1581 NADH dehydrogenase, putative.
 
 0.992
Aave_4035
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: cvi:CV3222 probable transcriptional regulator, LysR family.
 
     0.887
Aave_1274
KEGG: pol:Bpro_3245 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I).
  
 
 0.822
Aave_3289
Multicomponent K+:H+ antiporter subunit A; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); Na+/H+ antiporter MnhB subunit-related protein; KEGG: pen:PSEEN3533 multicomponent potassium-proton antiporter, subunit A/B (PhaAB); TC 2.A.63.1.1; 2.A.63.1.1.
 
 
 0.762
Aave_4518
PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: rba:RB8082 putative a deoxyribodipyrimidine photolyase-related protein.
  
     0.621
Aave_0666
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
    0.505
Aave_2100
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
    0.505
Aave_4370
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
    0.505
Aave_4462
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: eba:ebA2202 transcriptional regulator, LysR family.
 
     0.443
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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