Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_4077TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: reu:Reut_A1265 TRAP dicarboxylate transporter, DctM subunit. (432 aa)    
Predicted Functional Partners:
Aave_4076
PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: reu:Reut_A1264 tripartite ATP-independent periplasmic transporter, DctQ component.
 
 
 0.977
Aave_4078
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rme:Rmet_1150 TRAP dicarboxylate transporter, DctP subunit.
  
 0.934
Aave_3446
PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: pol:Bpro_4881 tripartite ATP-independent periplasmic transporter, DctQ component.
 
 
 0.851
Aave_0755
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: gka:GK1971 C4-dicarboxylate transport system (C4-dicarboxylate-binding protein).
  
 0.822
Aave_2794
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: gka:GK1971 C4-dicarboxylate transport system (C4-dicarboxylate-binding protein).
  
 0.819
Aave_3447
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: bbr:BB3421 putative periplasmic substrate-binding transport protein.
 
  
 0.813
Aave_1409
PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: csa:Csal_2479 TRAP dicarboxylate transporter, DctP subunit.
 
  
 0.810
Aave_2592
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pol:Bpro_3107 TRAP dicarboxylate transporter, DctP subunit.
 
  
 0.810
Aave_0752
PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: pol:Bpro_4501 tripartite ATP-independent periplasmic transporter, DctQ component.
 
 
 0.745
Aave_2593
PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: pol:Bpro_3106 tripartite ATP-independent periplasmic transporter, DctQ component.
 
 
 0.540
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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