Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_4142PFAM: glycosyl transferase, family 2; Methionine biosynthesis MetW; Methyltransferase type 11; Methyltransferase type 12; KEGG: rru:Rru_B0044 glycosyl transferase, family 2. (1287 aa)    
Predicted Functional Partners:
Aave_4163
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.892
Aave_1305
N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; KEGG: pol:Bpro_3199 N-acetylmuramoyl-L-alanine amidase.
   
 
 0.889
Aave_4146
PFAM: ABC-2 type transporter; KEGG: pae:PA5451 polysaccharide export transport system permease protein.
 
  
 0.880
Aave_0954
PFAM: ABC-2 type transporter; KEGG: pfl:PFL_5495 ABC-2 type transporte.
 
  
 0.853
Aave_3634
PFAM: response regulator receiver; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; KEGG: rfr:Rfer_1420 response regulator receiver domain protein.
 
 
 
 0.853
Aave_1209
PFAM: sugar transferase; KEGG: rme:Rmet_2718 sugar transferase.
  
  
 0.835
Aave_4425
TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rfr:Rfer_3719 flagellar basal-body rod FlgG; Belongs to the flagella basal body rod proteins family.
  
 
 0.832
Aave_4145
PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: mca:MCA2549 carbohydrate ABC transporter, ATP-binding protein, putative.
 
 
 0.831
Aave_4164
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
 0.829
Aave_4141
KEGG: net:Neut_0179 glycosyl transferase, family 2.
 
  
 0.827
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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