Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Aave_4152KEGG: eba:ebA1609 general secretion pathway protein M. (186 aa)    
Predicted Functional Partners:
Aave_0919
KEGG: pol:Bpro_1327 hypothetical protein.
     
 0.902
Aave_4154
KEGG: eba:ebA1612 general secretory pathway protein K.
     
 0.853
Aave_4151
KEGG: eba:ebA1607 hypothetical protein.
     
 0.835
Aave_4156
KEGG: eba:ebB44 general secretion pathway protein I.
     
 0.821
Aave_4157
TIGRFAM: general secretion pathway protein H; KEGG: eba:ebA1616 general secretion protein H.
       0.816
Aave_4155
KEGG: eba:ebA1615 general secretion pathway protein J.
     
 0.797
Aave_4153
PFAM: Fimbrial assembly family protein; KEGG: eba:ebA1610 hypothetical protein, INTERPRO suggestion: probable fimbrial assembly.
     
 0.795
Aave_4150
TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: eba:ebA1602 general (type II) secretion pathway (GSP) D protein.
     
 0.763
Aave_4158
TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: eba:ebB45 general secretion pathway protein G.
     
 0.714
Aave_4159
PFAM: type II secretion system protein; KEGG: eba:ebA1619 general secretion pathway protein F.
     
 0.656
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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