Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_4172Thiosulfate sulfurtransferase; SMART: Rhodanese domain protein; KEGG: pol:Bpro_4049 rhodanese-like. (159 aa)    
Predicted Functional Partners:
Aave_4173
PFAM: protein of unknown function DUF45; KEGG: pol:Bpro_4199 protein of unknown function DUF45.
       0.772
Aave_4174
PFAM: phospholipid/glycerol acyltransferase; KEGG: pol:Bpro_4200 phospholipid/glycerol acyltransferase.
       0.772
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
   0.681
rpsQ
SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
   0.593
Aave_4175
D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: pol:Bpro_4201 histidinol-phosphate phosphatase.
       0.555
Aave_4176
Hypothetical protein.
       0.549
glyS
glycyl-tRNA synthetase beta chain; KEGG: pol:Bpro_4202 glycine--tRNA ligase.
       0.549
Aave_4719
PFAM: beta-lactamase domain protein; KEGG: pol:Bpro_4844 beta-lactamase-like.
 
 
 0.521
glyQ
PFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: pol:Bpro_4203 glycine--tRNA ligase.
  
    0.487
Aave_2568
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.452
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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