Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
Aave_4196Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bpm:BURPS1710b_2019 ribose ABC transporter, periplasmic ribose-binding protein; TC 3.A.1.2.-. (318 aa)    
Predicted Functional Partners:
Aave_4197
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B0574 ABC sugar transporter, fused ATPase subunits; TC 3.A.1.2.-.
 
 0.995
Aave_4198
Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: ppu:PP_2456 ribose ABC transporter, permease protein; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.
 
 0.991
rbsD
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.974
Aave_2249
Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: bte:BTH_I2345 ribose ABC transporter, permease protein; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.912
Aave_2250
Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: bcn:Bcen_5625 inner-membrane translocator; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.912
Aave_3996
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; KEGG: ppu:PP_3761 sensor histidine kinase/response regulator.
   
 
 0.900
Aave_2240
PFAM: response regulator receiver; KEGG: xcv:XCV0528 two-component system sensor protein.
   
 
 0.892
Aave_2251
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bcn:Bcen_5626 ABC transporter-related protein; TC 3.A.1.2.-.
 
 
 0.892
Aave_4279
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-4 domain protein; KEGG: mag:amb1110 signal transduction histidine kinase.
   
 
 0.884
Aave_2063
Multi-sensor hybrid histidine kinase; KEGG: mag:amb1841 hypothetical protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
   
 
 0.882
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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