Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Aave_4226KEGG: rfr:Rfer_0814 dihydroneopterin aldolase. (125 aa)    
Predicted Functional Partners:
Aave_1974
TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: rfr:Rfer_2508 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase.
  
 
 0.994
Aave_2618
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
  
 
 0.994
Aave_3631
PFAM: GTP cyclohydrolase I; KEGG: pol:Bpro_0869 GTP cyclohydrolase I.
 
  
 0.951
Aave_1411
PFAM: Alkaline phosphatase; KEGG: rfr:Rfer_1326 alkaline phosphatase.
     
 0.915
Aave_3608
KEGG: pol:Bpro_1295 putative lipoprotein.
  
     0.764
Aave_4225
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: pol:Bpro_4087 short-chain dehydrogenase/reductase SDR.
     
 0.733
Aave_1996
PFAM: HemY domain protein; KEGG: pol:Bpro_3661 putative porphyrin biosynthesis related protein.
 
     0.728
Aave_2989
KEGG: rfr:Rfer_2656 hypothetical protein.
  
     0.715
Aave_3642
KEGG: rfr:Rfer_1293 hypothetical protein.
  
     0.682
Aave_1860
TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: rfr:Rfer_2686 FolC bifunctional protein; Belongs to the folylpolyglutamate synthase family.
  
  
 0.681
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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