Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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Score
Aave_4262Transcriptional regulator, IclR family; PFAM: regulatory protein, IclR; KEGG: reu:Reut_C5934 regulatory protein, IclR. (269 aa)    
Predicted Functional Partners:
Aave_3511
PFAM: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; KEGG: rfr:Rfer_0869 hypothetical protein.
  
  
 0.901
Aave_0741
PFAM: regulatory protein, IclR; KEGG: pol:Bpro_0445 transcriptional regulator, IclR family.
  
     0.763
Aave_0839
PFAM: regulatory protein, IclR; KEGG: ecs:ECs0401 transcriptional regulator for mhp operon.
  
     0.757
Aave_4263
PFAM: flavin reductase domain protein, FMN-binding; KEGG: reu:Reut_C5933 hypothetical protein.
       0.740
Aave_3331
PFAM: regulatory protein, IclR; KEGG: bja:bll6383 transcriptional regulatory protein.
  
     0.730
Aave_2272
PFAM: regulatory protein, IclR; KEGG: bxe:Bxe_B2965 transcriptional regulator, IclR family.
  
     0.727
Aave_1510
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: pol:Bpro_2090 transcriptional regulator, GntR family.
  
    0.432
Aave_4264
PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bcn:Bcen_2208 transposase IS116/IS110/IS902.
       0.402
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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