Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Aave_4381PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: rfr:Rfer_0564 putative signal transduction histidine kinase. (372 aa)    
Predicted Functional Partners:
Aave_4382
PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: rfr:Rfer_0563 two component transcriptional regulator, LuxR family.
 
 
 0.970
Aave_1121
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: bpm:BURPS1710b_A1463 DNA-binding response regulator, LuxR family.
 
 
 0.873
Aave_3862
PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: pol:Bpro_0881 two component transcriptional regulator, LuxR family.
 
 
 0.873
Aave_4229
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: bpm:BURPS1710b_A1463 DNA-binding response regulator, LuxR family.
 
 
 0.873
Aave_3591
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: rso:RSc2455 response regulator VSRC transcription regulator protein.
 
 
 0.870
Aave_0654
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; Bacterio-opsin activator, HTH domain protein; KEGG: rfr:Rfer_1869 two component transcriptional regulator, LuxR family.
 
 
 0.869
Aave_2497
PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: rme:Rmet_2880 two component transcriptional regulator, LuxR family.
 
 
 0.869
Aave_3996
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; KEGG: ppu:PP_3761 sensor histidine kinase/response regulator.
  
 
 0.622
Aave_4380
KEGG: rfr:Rfer_0565 hypothetical protein.
       0.595
Aave_3861
PFAM: response regulator receiver; KEGG: pol:Bpro_0882 response regulator receiver domain protein (CheY-like).
 
 
 0.572
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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