STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aave_4591KEGG: pfl:PFL_1145 hypothetical protein. (172 aa)    
Predicted Functional Partners:
lolA
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
    
 
 0.883
Aave_4592
PFAM: OmpA/MotB domain protein; KEGG: tbd:Tbd_0244 probable outer membrane protein.
 
 
0.777
Aave_3866
PFAM: Rubrerythrin; Ferritin, Dps family protein; KEGG: reu:Reut_A2901 rubrerythrin:ferritin and Dps.
 
    0.677
Aave_0842
TIGRFAM: TonB family protein; KEGG: pol:Bpro_1088 TonB-like.
    
   0.605
Aave_2225
Cell division and transport-associated protein TolA; TIGRFAM: TonB family protein; PFAM: TolA family protein; KEGG: rfr:Rfer_1159 TonB-like; TC 2.C.1.2.1.
    
   0.605
Aave_3244
KEGG: pol:Bpro_2620 hypothetical protein.
    
   0.605
Aave_3311
Outer membrane transport energization protein TonB; TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: pol:Bpro_3051 TonB-like; TC 2.C.1.1.1.
    
   0.605
Aave_4255
Outer membrane transport energization protein TonB; TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: rfr:Rfer_1159 TonB-like; TC 2.C.1.1.1.
    
   0.605
Aave_1291
PFAM: protein of unknown function DUF214; KEGG: pol:Bpro_3224 protein of unknown function DUF214.
   
 
 0.598
Aave_3700
TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: rfr:Rfer_3232 lipoprotein releasing system, transmembrane protein, LolC/E family.
    
 
 0.584
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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