Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Aave_4610PFAM: sulfatase; KEGG: pfo:Pfl_2584 sulfatase. (592 aa)    
Predicted Functional Partners:
Aave_3368
KEGG: gvi:gll1679 hypothetical protein.
  
     0.641
Aave_1961
KEGG: pfo:Pfl_3745 hypothetical protein.
  
     0.602
Aave_4611
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: ret:RHE_CH02674 probable oxidoreductase protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.576
Aave_0066
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: mfa:Mfla_1720 hypothetical protein.
  
     0.505
Aave_0971
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: mfa:Mfla_1720 hypothetical protein.
  
     0.498
Aave_0425
KEGG: nma:NMA1441 hypothetical protein.
 
     0.495
Aave_2213
KEGG: pol:Bpro_3593 hypothetical protein.
  
     0.495
Aave_1371
KEGG: bbr:BB3605 putative iron uptake protein.
  
     0.477
Aave_2390
PFAM: replication initiation factor; KEGG: nme:NMB1543 phage replication initiation protein.
  
     0.453
Aave_4609
Hypothetical protein.
       0.453
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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