Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_4620PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_0453 methyltransferase type 12. (201 aa)    
Predicted Functional Partners:
Aave_4666
Putative metal dependent phosphohydrolase; KEGG: rfr:Rfer_4051 HD-GYP domain-like.
  
     0.697
Aave_1125
PFAM: porin, Gram-negative type; KEGG: rso:RS00714 probable porin precursor transmembrane protein.
  
     0.662
Aave_0040
PFAM: outer membrane efflux protein; KEGG: dar:Daro_1877 outer membrane efflux protein.
  
     0.658
Aave_1852
Putative metal dependent phosphohydrolase; KEGG: rfr:Rfer_2693 HD-GYP domain-like.
  
     0.651
Aave_0267
PFAM: O-antigen polymerase; KEGG: xac:XAC3797 hypothetical protein.
  
     0.638
Aave_4565
Lipase; KEGG: xom:XOO_3175 lipase.
  
     0.618
Aave_4142
PFAM: glycosyl transferase, family 2; Methionine biosynthesis MetW; Methyltransferase type 11; Methyltransferase type 12; KEGG: rru:Rru_B0044 glycosyl transferase, family 2.
 
  
 0.616
Aave_1579
KEGG: rme:Rmet_1193 hypothetical protein.
  
     0.614
Aave_3467
PFAM: NUDIX hydrolase; KEGG: pol:Bpro_3852 NUDIX hydrolase.
  
     0.567
Aave_0991
PFAM: beta-lactamase domain protein; KEGG: reu:Reut_A0043 beta-lactamase-like.
  
     0.566
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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