STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aave_4663TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rfr:Rfer_4105 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (394 aa)    
Predicted Functional Partners:
Aave_4664
PFAM: acriflavin resistance protein; KEGG: dar:Daro_0459 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.944
Aave_4662
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rfr:Rfer_4106 RND efflux system, outer membrane lipoprotein, NodT.
 
 
 0.782
Aave_1461
PFAM: acriflavin resistance protein; KEGG: pol:Bpro_2028 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.775
Aave_1291
PFAM: protein of unknown function DUF214; KEGG: pol:Bpro_3224 protein of unknown function DUF214.
  
 
 0.741
Aave_4661
PFAM: regulatory protein, TetR; KEGG: mca:MCA1598 transcriptional regulator, TetR family.
 
   
 0.732
Aave_1363
TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: pol:Bpro_3428 hydrophobe/amphiphile efflux-1 HAE1.
 
 0.582
Aave_2811
PFAM: protein of unknown function DUF214; KEGG: pol:Bpro_1679 protein of unknown function DUF214.
 
 
 0.559
Aave_2040
PFAM: acriflavin resistance protein; KEGG: pol:Bpro_2828 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.558
Aave_2818
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: pol:Bpro_1664 type I secretion outer membrane protein, TolC.
  
 
 0.537
Aave_0038
TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: reu:Reut_B3503 heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.526
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.