STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_0002Protease-like protein; KEGG: pto:PTO0187 membrane associated serine protease. (781 aa)    
Predicted Functional Partners:
Cmaq_0003
KEGG: sso:SSO2602 hypothetical protein.
       0.610
rps24e
Ribosomal protein S24E-like protein; KEGG: pis:Pisl_1895 transcriptional regulator, fis family; Belongs to the eukaryotic ribosomal protein eS24 family.
       0.457
Cmaq_0001
KEGG: pai:PAE0829 hypothetical protein.
       0.428
Cmaq_0148
PFAM: major facilitator superfamily MFS_1; KEGG: sto:ST1852 hypothetical multidrug resistance protein.
  
     0.422
Cmaq_0603
PFAM: major facilitator superfamily MFS_1; KEGG: sto:ST1852 hypothetical multidrug resistance protein.
  
     0.413
Cmaq_1265
KEGG: pto:PTO0762 hypothetical protein.
  
     0.409
Cmaq_0964
PFAM: amino acid permease-associated region; KEGG: sso:SSO3224 amino acid transporter related protein.
  
     0.402
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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