STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_0048PFAM: von Willebrand factor type A; KEGG: pis:Pisl_0851 von Willebrand factor, type A. (474 aa)    
Predicted Functional Partners:
Cmaq_0047
PFAM: protein of unknown function DUF87; KEGG: pis:Pisl_0941 AAA ATPase.
 
     0.651
Cmaq_0511
PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pis:Pisl_0850 ATPase associated with various cellular activities, AAA_5.
 
     0.632
Cmaq_0046
KEGG: pis:Pisl_0942 hypothetical protein.
       0.551
Cmaq_0049
PFAM: major facilitator superfamily MFS_1; KEGG: sso:SSO1351 permease, multidrug efflux.
       0.441
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.