STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Cmaq_0063Ferredoxin-dependent glutamate synthase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; ferredoxin-dependent glutamate synthase; KEGG: tpe:Tpen_1139 ferredoxin-dependent glutamate synthase. (463 aa)    
Predicted Functional Partners:
Cmaq_0612
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pis:Pisl_0400 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
 
 0.948
Cmaq_0064
PFAM: tRNA synthetase class II (D K and N); KEGG: tpe:Tpen_1140 tRNA synthetase, class II (D, K and N).
 
  
 0.879
Cmaq_0030
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; KEGG: sso:SSO0683 hypothetical protein.
 
 
 0.816
Cmaq_0204
PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: pai:PAE1996 glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.706
thiE
Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
 
     0.640
rpl14
Ribosomal protein L14b/L23e; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.583
thiM
Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.
       0.558
tfb
Transcription factor TFIIB cyclin-related; Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB).
    
   0.547
Cmaq_1632
PFAM: Zinc finger TFIIB-type domain protein; Transcription factor TFIIB cyclin-related; KEGG: tko:TK1280 transcription initiation factor IIB.
    
   0.547
Cmaq_0065
GTPase-like protein; Similar to GTPase of unknown function; PFAM: GTP-binding protein HSR1-related; TGS domain protein; GTPase of unknown function-like; KEGG: tpe:Tpen_0715 GTPase of unknown function-like.
     
 0.538
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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