STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_0129PFAM: amino acid permease-associated region; KEGG: sai:Saci_1127 amino acid permease. (614 aa)    
Predicted Functional Partners:
Cmaq_1778
PFAM: amino acid permease-associated region; KEGG: tvo:TVN0718 amino acid transporter.
  
     0.726
Cmaq_1055
PFAM: Spore germination protein; amino acid permease-associated region; KEGG: sso:SSO1463 amino acid transporter.
  
     0.723
Cmaq_1492
PFAM: amino acid permease-associated region; KEGG: tpe:Tpen_1196 amino acid permease-associated region.
  
     0.722
Cmaq_0834
PFAM: amino acid permease-associated region; KEGG: sto:ST1858 hypothetical protein.
  
   
 0.679
Cmaq_0128
PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pis:Pisl_1029 threonine dehydratase.
  
 
 0.674
Cmaq_1089
PFAM: amidinotransferase; KEGG: tac:Ta0987 arginine deiminase related protein.
 
  
 0.416
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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