STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_0141KEGG: pis:Pisl_1661 hypothetical protein. (331 aa)    
Predicted Functional Partners:
Cmaq_0140
Hypothetical protein.
       0.773
Cmaq_0614
PFAM: Protein of unknown function DUF373; KEGG: pis:Pisl_1660 protein of unknown function DUF373.
       0.720
Cmaq_0615
PFAM: putative RNA methylase; KEGG: pai:PAE1634 hypothetical protein.
       0.701
Cmaq_0222
KEGG: tpe:Tpen_1757 hypothetical protein.
  
   
 0.672
Cmaq_0377
Chromosome segregation ATPase-like protein; KEGG: pai:PAE1451 hypothetical protein.
 
     0.632
Cmaq_0605
KEGG: tpe:Tpen_1757 hypothetical protein.
  
   
 0.593
taw3
Protein of unknown function DUF207; S-adenosyl-L-methionine-dependent methyltransferase that acts as a component of the wyosine derivatives biosynthesis pathway. Probably methylates N-4 position of wybutosine-86 to produce wybutosine-72; Belongs to the TYW3 family.
  
     0.584
Cmaq_0110
KEGG: rno:685407 hypothetical protein LOC685407.
  
     0.502
Cmaq_0142
PFAM: aldo/keto reductase; KEGG: tko:TK0845 oxidoreductase, aldo/keto reductase family.
       0.498
Cmaq_0701
KEGG: pai:PAE2936 hypothetical protein.
  
     0.491
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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