Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_0232PFAM: extracellular solute-binding protein family 5; KEGG: sso:SSO3043 ABC transporter, peptide binding protein. (787 aa)    
Predicted Functional Partners:
Cmaq_0695
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH299 oligopeptide ABC transporter permease protein.
 
 
 0.663
Cmaq_0683
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sto:ST2535 hypothetical peptide transporter permease protein.
 
 
 0.639
Cmaq_0684
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sso:SSO2671 ABC transporter, permease protein.
 
 
 0.623
Cmaq_0696
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sto:ST2532 hypothetical peptide transporter permease protein.
 
 
 0.585
Cmaq_0145
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH299 oligopeptide ABC transporter permease protein.
 
 
 0.583
Cmaq_1323
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sso:SSO2618 Dipeptide ABC transporter permease protein.
 
 
 0.523
Cmaq_0801
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pis:Pisl_0912 binding-protein-dependent transport systems inner membrane component.
 
 
 0.521
Cmaq_1324
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sso:SSO2617 Dipeptide ABC transporter permease protein.
 
 
 0.516
Cmaq_0802
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pai:PAE3086 oligopeptide ABC transporter, permease protein.
 
 
 0.505
Cmaq_0233
Hypothetical protein.
       0.491
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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