Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Cmaq_0248PFAM: protein of unknown function DUF59; KEGG: pai:PAE2055 hypothetical protein. (144 aa)    
Predicted Functional Partners:
Cmaq_0885
TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); seryl-tRNA synthetase class IIa; KEGG: hbu:Hbut_1249 seryl-tRNA synthetase.
       0.700
Cmaq_1841
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pis:Pisl_1744 FeS assembly ATPase SufC.
 
  
 0.646
Cmaq_0249
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; KEGG: sto:ST0687 dihydrolipoamide dehydrogenase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
 
     0.586
Cmaq_1839
PFAM: SufBD protein; KEGG: pfu:PF1285 hypothetical protein.
 
   
 0.538
Cmaq_1593
PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: sto:ST1380 cysteine synthase.
     
 0.516
Cmaq_1209
PFAM: molybdopterin binding domain; KEGG: tvo:TVN0585 competence/damage-inducible protein CinA N-terminal domain; Belongs to the CinA family.
       0.480
Cmaq_1078
TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: pis:Pisl_1745 FeS assembly protein SufB.
 
   
 0.458
Cmaq_1840
TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: pai:PAE1813 ABC transporter subunit, putative.
 
   
 0.444
Cmaq_0337
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: ape:APE_1484.1 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.440
Cmaq_1913
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: btk:BT9727_2708 enoyl-CoA hydratase.
  
  
 0.406
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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