Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_0254PFAM: protein of unknown function DUF1614; KEGG: pai:PAE2020 hypothetical protein. (254 aa)    
Predicted Functional Partners:
Cmaq_0255
TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: tpe:Tpen_1093 N-acetylglucosamine-6-phosphate deacetylase.
       0.693
Cmaq_1725
KEGG: mmp:MMP0915 nucleoside triphosphate: 5'-deoxyadenosylcobinamide phosphate nucleotidyltransferase.
       0.693
Cmaq_0256
TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: pis:Pisl_0270 acetate--CoA ligase.
       0.487
Cmaq_0488
TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; KEGG: pis:Pisl_0380 ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family.
       0.477
Cmaq_0960
PFAM: AIR synthase related protein domain protein; KEGG: pai:PAE0949 hydrogenase expression/formation protein HypE.
       0.472
Cmaq_0093
PFAM: Radical SAM domain protein; KEGG: sto:ST0626 hypothetical protein.
  
     0.411
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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