STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_0269D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; KEGG: pto:PTO1045 (S)-2-hydroxy-acid oxidase chain D. (467 aa)    
Predicted Functional Partners:
Cmaq_0270
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pis:Pisl_1345 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
 
  
 0.946
Cmaq_0846
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pai:PAE1038 D-3-phosphoglycerate dehydrogenase.
   
 0.931
Cmaq_0878
Putative transcriptional regulator, GntR family; PFAM: aminotransferase class I and II; KEGG: sto:ST2333 aspartate aminotransferase.
    
 0.912
Cmaq_1964
PFAM: aminotransferase class I and II; KEGG: pis:Pisl_1028 putative transcriptional regulator, GntR family.
    
 0.912
Cmaq_1223
SPP-like hydrolase; Catalyzes the dephosphorylation of 2-phosphoglycolate.
    
  0.902
Cmaq_0439
PFAM: Electron transfer flavoprotein alpha subunit; KEGG: ape:APE_0135 308aa long hypothetical electron transfer flavoprotein alpha subunit.
  
 
 0.727
Cmaq_0476
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: pis:Pisl_0645 electron transfer flavoprotein, alpha subunit.
  
 
 0.727
Cmaq_0809
Transketolase central region; PFAM: Transketolase domain protein; Transketolase central region; KEGG: sai:Saci_0181 pyridine-binding domain transketolase.
       0.720
Cmaq_0958
PFAM: UbiA prenyltransferase; KEGG: pai:PAE1784 hypothetical 4-hydroxybenzoate octaprenyltransferase.
    
 0.719
Cmaq_0271
Hypothetical protein; KEGG: afu:AF0661 heterodisulfide reductase, subunit E, putative.
  
  
 0.709
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.