Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_0271Hypothetical protein; KEGG: afu:AF0661 heterodisulfide reductase, subunit E, putative. (281 aa)    
Predicted Functional Partners:
Cmaq_0273
TIGRFAM: adenylylsulfate reductase, alpha subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: afu:AF1670 adenylylsulfate reductase, subunit A.
     
 0.799
Cmaq_0272
TIGRFAM: adenylylsulfate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rma:Rmag_0087 adenylylsulfate reductase, beta subunit.
     
 0.786
Cmaq_0274
TIGRFAM: sulfate adenylyltransferase; PFAM: ATP-sulfurylase; KEGG: afu:AF1667 sulfate adenylyltransferase.
     
 0.783
Cmaq_0275
KEGG: pis:Pisl_1512 hypothetical protein.
       0.757
Cmaq_0269
D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; KEGG: pto:PTO1045 (S)-2-hydroxy-acid oxidase chain D.
  
  
 0.709
Cmaq_1010
PFAM: protein of unknown function DUF162; KEGG: pis:Pisl_1348 protein of unknown function DUF162.
  
 
 0.708
Cmaq_0270
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pis:Pisl_1345 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
       0.608
Cmaq_0276
TIGRFAM: cytidyltransferase-related domain; PFAM: cytidylyltransferase; KEGG: pis:Pisl_0898 cytidyltransferase-related domain.
       0.514
gap
TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type II; PFAM: glyceraldehyde 3-phosphate dehydrogenase; dihydrodipicolinate reductase; KEGG: sso:SSO0528 NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase.
   
  
 0.415
Cmaq_0268
PFAM: Protein of unknown function DUF171; KEGG: pis:Pisl_0966 protein of unknown function DUF171.
       0.411
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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