STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_0338PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: pai:PAE0622 aldehyde ferredoxin oxidoreductase. (620 aa)    
Predicted Functional Partners:
Cmaq_0816
Hydroxypyruvate reductase; PFAM: MOFRL domain protein; KEGG: ape:APE_0996.1 glycerate kinase.
     
  0.900
Cmaq_0337
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: ape:APE_1484.1 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.637
Cmaq_0623
Transcriptional regulator of molybdate metabolism, LysR family; PFAM: regulatory protein LysR; KEGG: hbu:Hbut_0336 molybdate-binding protein, periplasmic component.
 
     0.491
Cmaq_0336
TIGRFAM: glycyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; KEGG: pis:Pisl_0895 glycyl-tRNA synthetase.
       0.413
Cmaq_1082
Thiamine pyrophosphate protein domain protein TPP-binding; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
  
  
 0.409
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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