STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_0345KEGG: sai:Saci_1240 hypothetical protein. (421 aa)    
Predicted Functional Partners:
Cmaq_0102
Membrane protein-like protein; KEGG: gvi:glr1356 hypothetical protein.
     
 0.782
Cmaq_0637
PFAM: Polyprenyl synthetase; KEGG: pai:PAE1013 dimethylallyltranstransferase / geranyltranstransferase; Belongs to the FPP/GGPP synthase family.
  
  
 0.643
Cmaq_0958
PFAM: UbiA prenyltransferase; KEGG: pai:PAE1784 hypothetical 4-hydroxybenzoate octaprenyltransferase.
  
  
 0.611
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with a modified folate serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta- hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
     
 0.587
Cmaq_0344
KEGG: pai:PAE1488 hypothetical protein.
       0.498
Cmaq_0017
KEGG: sto:ST2481 hypothetical protein.
  
     0.496
taw3
Protein of unknown function DUF207; S-adenosyl-L-methionine-dependent methyltransferase that acts as a component of the wyosine derivatives biosynthesis pathway. Probably methylates N-4 position of wybutosine-86 to produce wybutosine-72; Belongs to the TYW3 family.
  
   
 0.487
Cmaq_1838
PFAM: aspartate/glutamate/uridylate kinase; KEGG: hbu:Hbut_0269 carbamate kinase; Belongs to the carbamate kinase family.
       0.477
Cmaq_0205
KEGG: sso:SSO3189 amino acid transporter, putative.
  
     0.468
Cmaq_0817
PFAM: amino acid permease-associated region; KEGG: sso:SSO2549 amino acid transporter, putative.
  
     0.460
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.