STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_0397PFAM: inositol monophosphatase; KEGG: mth:MTH871 inositol-1-monophosphatase. (300 aa)    
Predicted Functional Partners:
Cmaq_1653
PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: pis:Pisl_1718 myo-inositol-1-phosphate synthase.
 
 
 0.953
Cmaq_0398
PFAM: PfkB domain protein; KEGG: tpe:Tpen_0612 PfkB domain protein.
  
  
 0.806
Cmaq_0488
TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; KEGG: pis:Pisl_0380 ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family.
 
  
 0.764
gap
TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type II; PFAM: glyceraldehyde 3-phosphate dehydrogenase; dihydrodipicolinate reductase; KEGG: sso:SSO0528 NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase.
  
  
 0.739
Cmaq_0394
PFAM: Fmu (Sun) domain protein; PUA domain containing protein; KEGG: pis:Pisl_0665 PUA domain containing protein.
 
  
 0.724
spt5
Transcription termination antitermination factor; Stimulates transcription elongation; Belongs to the archaeal Spt5 family.
   
 
 0.687
hisB
PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: plt:Plut_0718 imidazoleglycerol-phosphate dehydratase.
  
  
 0.686
nusA
NusA family KH domain protein; Participates in transcription termination. Belongs to the NusA family.
  
   0.683
hisF
Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
  
  
 0.644
rps10
Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
   
 
 0.642
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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