STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
surEStationary-phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. (270 aa)    
Predicted Functional Partners:
Cmaq_0020
PFAM: fumarate lyase; Adenylosuccinate lyase domain protein; KEGG: tws:TW800 adenylosuccinate lyase.
 
  
 0.940
Cmaq_1202
PFAM: GMP synthase domain protein; KEGG: sto:ST2345 GMP synthase (glutamine-hydrolysing).
    
 0.935
Cmaq_1203
PFAM: glutamine amidotransferase class-I; KEGG: sso:SSO2451 GMP synthase (glutamine-hydrolysing).
    
 0.929
Cmaq_1624
Malate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; KEGG: ape:APE_1507.1 IMP dehydrogenase.
    
 0.929
Cmaq_0629
Uridylate kinase, putative; Catalyzes the reversible phosphorylation of UMP to UDP.
    
 0.928
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
 
  
 0.926
Cmaq_0753
TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: pab:PAB1505 orotidine-5'-phosphate decarboxylase.
    
 0.926
Cmaq_1567
PFAM: phosphoribosyltransferase; KEGG: dps:DP1516 related to adenine phosphoribosyltransferase.
    
 0.923
tmk
dTMP kinase; PFAM: thymidylate kinase; KEGG: pcl:Pcal_0126 dTMP kinase.
    
 0.920
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
 0.912
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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