Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_0426Hypothetical protein; KEGG: afu:AF1828 NADH dehydrogenase, subunit 3. (134 aa)    
Predicted Functional Partners:
Cmaq_0427
TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: afu:AF1829 F420H2:quinone oxidoreductase, 39.7 kDa subunit, putative.
  
 0.999
Cmaq_0428
NADH dehydrogenase (quinone); PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: afu:AF1830 F420H2:quinone oxidoreductase, 45 kDa subunit.
  
 0.999
Cmaq_0303
PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: afu:AF1831 F420H2:quinone oxidoreductase, 41.2 kDa subunit, putative.
  
 0.998
Cmaq_0304
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pas:Pars_0647 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
  
 0.997
Cmaq_1279
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: afu:AF1827 F420H2:quinone oxidoreductase, 43.2 kDa subunit, putative.
  
 0.997
Cmaq_1280
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: afu:AF1826 F420H2:quinone oxidoreductase, 72.4 kDa subunit.
  
 
 0.992
Cmaq_1282
PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: afu:AF1824 F420H2:quinone oxidoreductase, 11.2 kDa subunit, putative.
  
 
 0.991
Cmaq_1936
PFAM: cytochrome c oxidase subunit II; KEGG: neu:NE0684 possible cytochrome-c oxidase chain II.
   
 0.985
Cmaq_1937
PFAM: cytochrome c oxidase subunit I; KEGG: nha:Nham_2711 cytochrome c oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family.
   
 
 0.983
Cmaq_1283
KEGG: afu:AF1823 F420H2:quinone oxidoreductase, 16.5 kDa subunit, putative.
  
 
 0.981
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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