STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Cmaq_0453Putative transcriptional regulator; PFAM: regulatory protein MarR; regulatory protein ArsR; Helix-turn-helix type 11 domain protein; KEGG: ape:APE_0293 putative transcriptional regulator, ArsR family. (106 aa)    
Predicted Functional Partners:
Cmaq_0452
TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: pai:PAE2535 phosphomethylpyrimidine kinase.
 
    0.520
Cmaq_1725
KEGG: mmp:MMP0915 nucleoside triphosphate: 5'-deoxyadenosylcobinamide phosphate nucleotidyltransferase.
  
     0.504
Cmaq_0595
Phosphate uptake regulator, PhoU; PFAM: SpoVT/AbrB domain protein; PhoU family protein; KEGG: tpe:Tpen_1069 phosphate uptake regulator, PhoU.
 
   
 0.460
Cmaq_0374
PFAM: GCN5-related N-acetyltransferase; KEGG: pai:PAE1652 N-acyltransferase.
  
     0.445
gap
TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type II; PFAM: glyceraldehyde 3-phosphate dehydrogenase; dihydrodipicolinate reductase; KEGG: sso:SSO0528 NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase.
 
   
 0.420
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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