STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_0461Hypothetical protein. (144 aa)    
Predicted Functional Partners:
Cmaq_0462
PFAM: RNA polymerase Rpb6; KEGG: pai:PAE3271 DNA-directed RNA polymerase subunit.
       0.560
psmB1
Proteasome endopeptidase complex; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
       0.550
Cmaq_0459
PFAM: peptidylprolyl isomerase FKBP-type; KEGG: pai:PAE0805 FKBP-type peptidyl-prolyl cis-trans isomerases.
       0.550
rps17e
KEGG: hbu:Hbut_0482 30S ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.
       0.550
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.