Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_0473PFAM: Translin; KEGG: pis:Pisl_1593 translin. (189 aa)    
Predicted Functional Partners:
ribK
Protein of unknown function DUF120; Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN); Belongs to the archaeal riboflavin kinase family.
     
 0.703
Cmaq_0475
TIGRFAM: ZPR1-like zinc finger protein; ZPR1-related zinc finger protein; PFAM: Zinc finger, ZPR1-type; KEGG: pis:Pisl_1210 ZPR1-like zinc finger protein.
 
     0.674
Cmaq_0474
PFAM: TatD-related deoxyribonuclease; KEGG: pis:Pisl_1844 TatD-related deoxyribonuclease.
       0.590
taw1
Wyosine base formation domain protein; Component of the wyosine derivatives biosynthesis pathway that catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine (imG-14) on guanosine-37 of tRNA(Phe).
 
     0.551
nfi
Deoxyribonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.
       0.477
Cmaq_0476
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: pis:Pisl_0645 electron transfer flavoprotein, alpha subunit.
       0.454
Cmaq_0477
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: pis:Pisl_0646 electron transfer flavoprotein beta-subunit.
       0.454
Cmaq_0478
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pai:PAE0723 ferredoxin like protein.
       0.454
Cmaq_0479
Electron-transferring-flavoprotein dehydrogenase; PFAM: monooxygenase FAD-binding; HI0933 family protein; FAD dependent oxidoreductase; KEGG: pis:Pisl_0648 FAD dependent oxidoreductase.
       0.454
Cmaq_1245
TIGRFAM: cytidyltransferase-related domain; PFAM: cytidylyltransferase; Protein of unknown function DUF357; KEGG: pai:PAE0683 cytidyltransferase.
      
 0.445
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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