Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_0539PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pai:PAE3184 pyruvate formate-lyase activating enzyme homolog. (376 aa)    
Predicted Functional Partners:
Cmaq_1590
PFAM: protein of unknown function DUF52; KEGG: pai:PAE0818 conserved hypothetical protein; Belongs to the MEMO1 family.
     0.956
Cmaq_0360
PFAM: AMMECR1 domain protein; KEGG: pai:PAE0745 hypothetical protein.
 
     0.780
Cmaq_0538
PFAM: PEBP family protein; KEGG: pho:PH1269 hypothetical protein.
       0.565
thiL
Thiamine monophosphate kinase-like protein; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
 
     0.549
Cmaq_0319
PFAM: AMMECR1 domain protein; KEGG: afu:AF1969 hypothetical protein.
 
     0.500
Cmaq_0813
PFAM: Rieske [2Fe-2S] domain protein; KEGG: tvo:TVN0978 ferredoxin.
  
  
 0.465
Cmaq_1270
PFAM: Rieske [2Fe-2S] domain protein; KEGG: sai:Saci_0228 hypothetical protein.
  
  
 0.465
gap
TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type II; PFAM: glyceraldehyde 3-phosphate dehydrogenase; dihydrodipicolinate reductase; KEGG: sso:SSO0528 NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase.
     
 0.430
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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