Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_0582PFAM: Translation initiation factor IF2/IF5; KEGG: pis:Pisl_1439 translation initiation factor IF5. (136 aa)    
Predicted Functional Partners:
eif1a
S1 IF1 family protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
 
 0.991
Cmaq_1531
PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Initiation factor eIF2 gamma, C terminal; KEGG: pis:Pisl_0078 protein synthesis factor, GTP-binding.
  
 0.987
Cmaq_1359
PFAM: RNA binding S1 domain protein; Eukaryotic translation initiation factor 2, alpha subunit; KEGG: pis:Pisl_0433 translation initiation factor 2, alpha subunit.
  
 0.984
rps4e
PFAM: RNA-binding S4 domain protein; Ribosomal protein S4E, central; KEGG: pis:Pisl_0560 ribosomal protein S4E, central; Belongs to the eukaryotic ribosomal protein eS4 family.
  
  0.953
rps17
Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
 
  0.943
rps15
PFAM: ribosomal protein S15; Ribosomal S13S15-like; KEGG: pis:Pisl_0780 ribosomal S13S15-like protein.
  
 0.921
rpl7ae
Ribosomal protein L7Ae/L30e/S12e/Gadd45; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.
  
  0.913
rps3ae
PFAM: ribosomal protein S3Ae; KEGG: pis:Pisl_0771 ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.
 
  0.906
Cmaq_0980
PFAM: KH type 1 domain protein; KEGG: hbu:Hbut_1405 universally conserved protein.
 
    0.900
Cmaq_0322
PFAM: ribosomal protein S12/S23; SMART: Hedgehog/intein hint domain protein; KEGG: mja:MJ1042 DNA-directed RNA polymerase subunit A'.
 
 0.893
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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