Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_0586PFAM: OsmC family protein; KEGG: bch:Bcen2424_3268 OsmC family protein. (179 aa)    
Predicted Functional Partners:
Cmaq_0587
PFAM: Rhodanese domain protein; KEGG: pai:PAE2582 thiosulfate sulfurtransferase.
       0.780
Cmaq_0470
PFAM: Carboxymuconolactone decarboxylase; Cupin domain protein; Cupin 2 conserved barrel domain protein; KEGG: rfr:Rfer_2441 carboxymuconolactone decarboxylase.
  
  
 0.757
Cmaq_0588
PFAM: protein of unknown function DUF255; KEGG: pai:PAE2717 hypothetical protein.
 
     0.665
Cmaq_0585
PFAM: Methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein; KEGG: wsu:WS1831 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (methionine synthase, vitamin-B12 independent isozyme)(cobalamin-independent methionine synthase).
       0.574
Cmaq_0584
PFAM: SirA family protein; KEGG: tte:TTE0083 predicted transcriptional regulator.
 
    0.493
Cmaq_0249
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; KEGG: sto:ST0687 dihydrolipoamide dehydrogenase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
 
   
 0.400
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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