STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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kae1Putative metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37; Belongs to the KAE1 / TsaD family. (331 aa)    
Predicted Functional Partners:
Cmaq_0705
Mn2+-dependent serine/threonine protein kinase; KEGG: pai:PAE2192 hypothetical protein.
  
 0.993
Cmaq_0281
Sua5/YciO/YrdC/YwlC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
  
 0.894
Cmaq_1070
Hypothetical protein.
    
 
 0.876
rps27ae
PFAM: Ribosomal protein S27a; KEGG: pai:PAE2432 ribosomal protein S27; Belongs to the eukaryotic ribosomal protein eS31 family.
       0.860
Cmaq_1974
TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: pis:Pisl_0615 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Belongs to the HAM1 NTPase family.
 
   
 0.857
Cmaq_0608
TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; KEGG: tpe:Tpen_0950 phenylalanyl-tRNA synthetase, alpha subunit.
 
   
 0.850
flpA
Non-specific serine/threonine protein kinase; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA; Belongs to the methyltransferase superfamily. Fibrillarin family.
 
 
 0.816
rps15
PFAM: ribosomal protein S15; Ribosomal S13S15-like; KEGG: pis:Pisl_0780 ribosomal S13S15-like protein.
 
   
 0.813
rps24e
Ribosomal protein S24E-like protein; KEGG: pis:Pisl_1895 transcriptional regulator, fis family; Belongs to the eukaryotic ribosomal protein eS24 family.
  
    0.798
infB
Translation initiation factor aIF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2.
 
  
 0.795
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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