Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_0601PFAM: transcriptional regulator TrmB; KEGG: pho:PH0751 hypothetical protein. (333 aa)    
Predicted Functional Partners:
Cmaq_0146
PFAM: transcriptional regulator TrmB; KEGG: mka:MK0800 predicted transcriptional regulator containing a wHTH DNA-binding domain.
  
     0.555
Cmaq_0602
PFAM: glycosyl hydrolase 38 domain protein; KEGG: aba:Acid345_0644 glycosyl hydrolases 38-like.
       0.527
Cmaq_0600
PFAM: extracellular solute-binding protein family 5; KEGG: sso:SSO3043 ABC transporter, peptide binding protein.
       0.517
fau-1
Protein of unknown function DUF402; Probable RNase involved in rRNA stability through maturation and/or degradation of precursor rRNAs. Binds to RNA in loop regions with AU-rich sequences.
  
     0.483
Cmaq_1149
SMART: helix-turn-helix domain protein; KEGG: pai:PAE1638 putative transcriptional regulator.
  
   
 0.463
Cmaq_1138
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pto:PTO0380 hypothetical membrane protein.
 
     0.461
Cmaq_1963
Protein of unknown function DUF359; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA).
  
     0.450
Cmaq_0447
Phosphate uptake regulator, PhoU; PFAM: SpoVT/AbrB domain protein; PhoU family protein; KEGG: pai:PAE2220 hypothetical protein.
  
     0.444
Cmaq_1966
Phosphate/sulphate permease-like protein; KEGG: tvo:TVN0063 phosphate permease.
  
     0.444
Cmaq_1894
PFAM: protein of unknown function DUF99; KEGG: mtp:Mthe_0335 protein of unknown function DUF99; Belongs to the UPF0215 family.
  
     0.431
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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