Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Cmaq_0605KEGG: tpe:Tpen_1757 hypothetical protein. (353 aa)    
Predicted Functional Partners:
Cmaq_0606
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sai:Saci_2165 glycerophosphoryl diester phosphodiesterase.
 
     0.661
Cmaq_0608
TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; KEGG: tpe:Tpen_0950 phenylalanyl-tRNA synthetase, alpha subunit.
 
     0.640
Cmaq_0141
KEGG: pis:Pisl_1661 hypothetical protein.
  
   
 0.593
Cmaq_0607
TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase B5; KEGG: tpe:Tpen_0951 phenylalanyl-tRNA synthetase, beta subunit.
       0.588
Cmaq_0377
Chromosome segregation ATPase-like protein; KEGG: pai:PAE1451 hypothetical protein.
  
     0.510
Cmaq_0609
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: sto:ST0126 hypothetical coenzyme PQQ synthesis protein.
       0.495
Cmaq_0326
KEGG: pai:PAE0506 paREP15, putative coiled-coil protein.
  
     0.491
Cmaq_1997
Hypothetical protein; KEGG: pai:PAE1943 paREP5.
  
     0.464
Cmaq_0873
SMART: actin/actin family protein; KEGG: pis:Pisl_0887 actin/actin family protein.
  
     0.463
Cmaq_0110
KEGG: rno:685407 hypothetical protein LOC685407.
  
     0.457
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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