Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_0656PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sso:SSO3013 dehydrogenase, putative. (320 aa)    
Predicted Functional Partners:
Cmaq_0655
TIGRFAM: methionyl-tRNA synthetase, beta subunit; PFAM: t-RNA-binding domain protein; KEGG: pis:Pisl_0349 tRNA-binding domain protein.
       0.773
Cmaq_1495
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rle:RL0824 putative oxidoreductase.
  
     0.721
Cmaq_0947
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pfu:PF0766 putative dehydrogenase.
  
     0.702
lysS
TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: sso:SSO0090 Lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.557
Cmaq_0654
PFAM: extracellular solute-binding protein family 5; KEGG: sso:SSO3043 ABC transporter, peptide binding protein.
       0.526
Cmaq_0906
PFAM: oxidoreductase domain protein; KEGG: pai:PAE0870 conserved NAD/P oxidoreductase.
  
     0.435
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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