STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_0682PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: oih:OB3420 NADH-dependent dyhydrogenase. (334 aa)    
Predicted Functional Partners:
Cmaq_0681
Oxidoreductase domain protein; PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: oih:OB3421 NADH-dependent dyhydrogenase.
 
    
0.831
Cmaq_0906
PFAM: oxidoreductase domain protein; KEGG: pai:PAE0870 conserved NAD/P oxidoreductase.
  
     0.588
Cmaq_0683
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sto:ST2535 hypothetical peptide transporter permease protein.
  
    0.579
Cmaq_0684
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sso:SSO2671 ABC transporter, permease protein.
       0.566
lysS
TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: sso:SSO0090 Lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.557
Cmaq_0680
TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: sai:Saci_0883 ammonia transporter.
  
    0.517
Cmaq_0685
PFAM: extracellular solute-binding protein family 5; KEGG: sto:ST2534 putative peptide transport system substrate-binding protein.
       0.411
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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