STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_0697TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: tte:TTE0227 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component. (340 aa)    
Predicted Functional Partners:
Cmaq_1324
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sso:SSO2617 Dipeptide ABC transporter permease protein.
  
 0.977
Cmaq_0696
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sto:ST2532 hypothetical peptide transporter permease protein.
  
 0.975
Cmaq_0695
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH299 oligopeptide ABC transporter permease protein.
 
 
 0.958
Cmaq_0684
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sso:SSO2671 ABC transporter, permease protein.
  
 0.929
Cmaq_0802
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pai:PAE3086 oligopeptide ABC transporter, permease protein.
  
 0.890
Cmaq_0772
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tpe:Tpen_1404 ABC transporter related.
 
   
0.875
Cmaq_0801
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pis:Pisl_0912 binding-protein-dependent transport systems inner membrane component.
 
 
 0.854
Cmaq_1323
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sso:SSO2618 Dipeptide ABC transporter permease protein.
 
 
 0.853
Cmaq_0145
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH299 oligopeptide ABC transporter permease protein.
 
 
 0.842
Cmaq_0683
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sto:ST2535 hypothetical peptide transporter permease protein.
 
 
 0.839
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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