STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_0701KEGG: pai:PAE2936 hypothetical protein. (201 aa)    
Predicted Functional Partners:
Cmaq_1741
PFAM: metallophosphoesterase; SMART: serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; KEGG: pai:PAE2004 serine/threonine specific protein phosphatase.
   
 0.789
Cmaq_0470
PFAM: Carboxymuconolactone decarboxylase; Cupin domain protein; Cupin 2 conserved barrel domain protein; KEGG: rfr:Rfer_2441 carboxymuconolactone decarboxylase.
  
  
 0.765
Cmaq_1597
KEGG: sai:Saci_1831 hypothetical protein.
       0.696
Cmaq_0556
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pai:PAE2070 acyl-CoA dehydrogenase.
  
 0.685
Cmaq_1918
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pis:Pisl_1964 acyl-CoA dehydrogenase domain protein.
  
 0.685
Cmaq_0702
TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: sto:ST2203 2-isopropylmalate synthase.
  
 
 0.551
Cmaq_0700
PFAM: ADP-ribosylation/Crystallin J1; KEGG: sma:SAV1919 hypothetical protein.
 
     0.539
Cmaq_1150
PFAM: dienelactone hydrolase; KEGG: tte:TTE1809 hydrolases of the alpha/beta superfamily.
  
 
 0.518
Cmaq_0141
KEGG: pis:Pisl_1661 hypothetical protein.
  
     0.491
Cmaq_0497
PFAM: FAD dependent oxidoreductase; KEGG: pis:Pisl_1612 FAD dependent oxidoreductase.
 
 
 0.453
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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