STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_0708PFAM: Xylose isomerase domain protein TIM barrel; KEGG: eca:ECA1953 putative xylose isomerase. (371 aa)    
Predicted Functional Partners:
Cmaq_1366
PFAM: PfkB domain protein; KEGG: bch:Bcen2424_2597 PfkB domain protein.
 
 
 0.929
Cmaq_1814
PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: sso:SSO2717 alcohol dehydrogenase (Zn containing).
    
 0.903
Cmaq_0078
PFAM: ROK family protein; KEGG: oih:OB1919 glucose kinase.
    
 0.812
Cmaq_0314
PFAM: ROK family protein; KEGG: pai:PAE3437 glucokinase (ROK family protein), conjectural.
    
 0.812
Cmaq_0408
PFAM: glycoside hydrolase family 1; KEGG: sso:SSO3019 beta-galactosidase; Belongs to the glycosyl hydrolase 1 family.
    
  0.803
Cmaq_0652
PFAM: glycoside hydrolase family 1; KEGG: pfu:PF0073 beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
    
  0.803
Cmaq_0709
PFAM: carbohydrate kinase FGGY; KEGG: sus:Acid_3424 carbohydrate kinase, FGGY.
 
     0.727
Cmaq_0711
PFAM: class II aldolase/adducin family protein; KEGG: mta:Moth_0704 class II aldolase/adducin-like.
     
 0.622
Cmaq_0710
PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: chy:CHY_0789 aldehyde ferredoxin oxidoreductase, tungsten-containing.
       0.596
Cmaq_1497
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bcl:ABC0577 oxidoreductase.
 
  
 0.452
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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