STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_0740TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: pis:Pisl_1085 cytidine deaminase. (130 aa)    
Predicted Functional Partners:
Cmaq_0392
Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.
  
 
 0.968
surE
Stationary-phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
    
 0.908
Cmaq_1546
PFAM: purine or other phosphorylase family 1; KEGG: sai:Saci_1247 5'-methylthioadenosine phosphorylase.
  
  
 0.698
Cmaq_1197
TIGRFAM: isoleucyl-tRNA synthetase; KEGG: pis:Pisl_1650 isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.694
Cmaq_0741
KEGG: tac:Ta0141 proline/betaine transport protein related.
       0.655
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
     
 0.545
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
     
 0.447
Cmaq_1738
TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: sai:Saci_2375 isocitrate dehydrogenase.
    
  0.420
Cmaq_0278
PFAM: PBS lyase HEAT domain protein repeat-containing protein; Peptidase M1 membrane alanine aminopeptidase; KEGG: pis:Pisl_1642 peptidase M1, membrane alanine aminopeptidase.
    
  0.409
Cmaq_0930
PFAM: PBS lyase HEAT domain protein repeat-containing protein; Peptidase M1 membrane alanine aminopeptidase; KEGG: pis:Pisl_1642 peptidase M1, membrane alanine aminopeptidase.
    
  0.409
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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