STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_0741KEGG: tac:Ta0141 proline/betaine transport protein related. (258 aa)    
Predicted Functional Partners:
Cmaq_1365
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: tac:Ta1373 transport protein MmlH related protein.
  
     0.702
Cmaq_0740
TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: pis:Pisl_1085 cytidine deaminase.
       0.655
Cmaq_0328
PFAM: major facilitator superfamily MFS_1; KEGG: sai:Saci_1948 transporter.
  
     0.639
Cmaq_0759
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: tac:Ta0442 transport membrane protein related protein.
  
     0.611
Cmaq_1199
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pto:PTO0100 transporter.
  
     0.583
Cmaq_1414
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: sso:SSO2528 metabolite transport protein.
  
     0.494
Cmaq_0821
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: tac:Ta0452 sugar transport protein related protein.
  
     0.460
Cmaq_0223
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: sai:Saci_1731 sugar transporter.
  
     0.457
Cmaq_0712
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: tac:Ta0775 sugar transport protein related protein.
  
     0.450
Cmaq_1618
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pto:PTO0093 phosphate transporter.
  
     0.445
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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