Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_0784PFAM: amidohydrolase; KEGG: pai:PAE0322 dihydroorotase (pyrC). (407 aa)    
Predicted Functional Partners:
pyrB
TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: pis:Pisl_1066 aspartate carbamoyltransferase.
 0.999
Cmaq_0564
PFAM: dihydroorotate dehydrogenase; KEGG: pub:SAR11_0209 dihydroorotate dehydrogenase.
 
 0.998
carA
TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: pai:PAE0946 carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.
  
 0.995
Cmaq_1296
TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; RimK domain protein ATP-grasp; KEGG: pai:PAE0947 carbamoyl-phosphate synthase large subunit.
 
 0.995
Cmaq_0753
TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: pab:PAB1505 orotidine-5'-phosphate decarboxylase.
  
  
 0.975
pyrI
Aspartate carbamoyltransferase, regulatory subunit; Involved in allosteric regulation of aspartate carbamoyltransferase.
    
 0.973
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
 
  
 0.970
Cmaq_1367
PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: pis:Pisl_1180 multiple antibiotic resistance (MarC)-related protein.
       0.700
Cmaq_0923
Cell division control protein 6 related; Involved in regulation of DNA replication.
  
 
   0.610
Cmaq_1389
PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: sto:ST1117 hypothetical transporter.
  
  
 0.569
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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